Between brackets is the number of accepted species

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- Mollusca (132 754)
- Subphylum Aculifera
- Subphylum Conchifera
- Subphylum Placophora accepted as Polyplacophora
- Superclass Aplacophora
- Class Amphineura accepted as Aculifera
- Class Bivalvia (24 992)
- Class Caudofoveata (143)
- Class Cephalopoda (1 832)
- Subclass Coleoidea (1 135)
- Superorder Ammonoida † (76)
- Superorder Bactritoidea †
- Superorder Decabrachia represented as Decapodiformes
- Superorder Decapodiformes (715)
- Order [unassigned] Decapodiformes (2)
- Order Aulacoceratida † (18)
- Order Bathyteuthida (9)
- Order Belemnitida † (131)
- Order Diplobelida † (7)
- Order Idiosepida (8)
- Order Myopsida (48)
- Order Oegopsida (255)
- Order Palaecoleoidea † accepted as Aulacoceratida †
- Order Protobelemnoidea † accepted as Aulacoceratida †
- Order Sepiida (223)
- Suborder Sepiina (134)
- Suborder Sepiolida accepted as Sepiolina
- Suborder Sepiolina (89)
- Superfamily Sepioloidea Leach, 1817 (89)
- Family Sepiadariidae P. Fischer, 1882 (10)
- Family Sepiolidae Leach, 1817 (79)
- Subfamily Heteroteuthinae Appellöf, 1898 (19)
- Subfamily Rossiinae Appellöf, 1898 (20)
- Subfamily Sepiolidae incertae sedis (1)
- Subfamily Sepiolinae Leach, 1817 (39)
- Tribe Euprymnini G. Sanchez, Fernández-Álvarez, Taite, Sugimoto, Jolly, Simakov, Marlétaz, Allcock & Rokhsar, 2021 (18)
- Tribe Sepiolinae incertae sedis (2)
- Tribe Sepiolini Leach, 1817 (19)
- Genus Adinaefiola Bello, 2020 (3)
- Genus Boletzkyola Bello, 2020 (1)
- Genus Heterosepiola Grimpe, 1922 accepted as Sepiola Leach, 1817
- Genus Rondeletiola Naef, 1921 (2)
- Genus Sepietta Naef, 1912 (3)
- Species Sepietta minor Naef, 1912 accepted as Rondeletiola minor (Naef, 1912)
- Species Sepietta neglecta Naef, 1916
- Species Sepietta obscura Naef, 1916
- Species Sepietta oweniana (A. d'Orbigny, 1841)
- Species Sepietta petersii (Steenstrup, 1887) accepted as Sepietta oweniana (A. d'Orbigny, 1841)
- Genus Sepiola Leach, 1817 (10)
- Order Spirulida (13)
- Order Teuthida
- Family Bayanoteuthidae Naef, 1922 †
- Family Mississaepiidae Doguzhaeva, P. G. Weaver & Ciampaglio, 2014 † (1)
- Superorder Octobrachia represented as Octopodiformes
- Superorder Octopodiformes (341)
- Order Coleoidea incertae sedis † (3)
- Subclass Endoceratia † (32)
- Subclass Multiceratia † (290)
- Subclass Nautiloida (136)
- Subclass Orthoceratia † (200)
- Subclass Plectronoceratia † (16)
- Subclass Tarphyceratia † (23)
- Class Conchifera accepted as Bivalvia
- Class Cricoconarida † (1)
- Class Gastropoda (102 679)
- Class Lamellibranchiata accepted as Bivalvia
- Class Loricata accepted as Polyplacophora
- Class Mollusca incertae sedis † (372)
- Class Monoplacophora (229)
- Class Pelecypoda accepted as Bivalvia
- Class Polyplacophora (1 377)
- Class Polyplaxiphora accepted as Polyplacophora
- Class Rostroconchia † (64)
- Class Scaphopoda (752)
- Class Solenoconchia accepted as Scaphopoda
- Class Solenogastres (313)
- Subclass Chaetodermomorpha accepted as Caudofoveata