Between brackets is the number of accepted species

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- Mollusca (132 851)
- Subphylum Aculifera
- Subphylum Conchifera
- Subphylum Placophora accepted as Polyplacophora
- Superclass Aplacophora
- Class Amphineura accepted as Aculifera
- Class Bivalvia (25 013)
- Class Caudofoveata (143)
- Class Cephalopoda (1 834)
- Class Conchifera accepted as Bivalvia
- Class Cricoconarida † (1)
- Class Gastropoda (102 753)
- Subclass Amphigastropoda † (396)
- Suborder Liljevallospiroidei † accepted as Bellerophontoidea F. McCoy, 1852 †
- Superfamily Bellerophontoidea F. McCoy, 1852 † (396)
- Family Bellerophontidae McCoy, 1852 † (253)
- Subfamily Bellerophontinae McCoy, 1852 † (171)
- Genus Aglaoglypta Knight, 1942 † (7)
- Genus Bellerophon Montfort, 1808 † (108)
- Genus Bubovicus Horný, 1962 † (1)
- Genus Khumerspira Murata, 1974 † (2)
- Genus Kodymites Horný, 1962 † (2)
- Genus Liljevallospira Knight, 1945 † (2)
- Genus Pharkidonotus Girty, 1911 † (12)
- Genus Praematuratropis Rollins, Eldredge & Spiller, 1971 † (1)
- Genus Prosoptychus Perner, 1903 † (8)
- Genus Ptychobellerophon Delpey, 1941 † (1)
- Genus Semilukispira Blodgett & Frýda, 1999 † (1)
- Genus Sphaerocyclus Perner, 1903 † (7)
- Genus Waagenella de Koninck, 1883 † (19)
- Subfamily Bucanopsinae Wahlman, 1992 † (34)
- Subfamily Cymbulariinae Horný, 1963 † (4)
- Subfamily Knightitinae Knight, 1956 † (29)
- Genus Atlantobellerophon Trechmann, 1930 † (1)
- Genus Conradella Ulrich & Scofield, 1897 † accepted as Phragmolites Conrad, 1838 †
- Genus Dicellonema W. Yü & H.J. Wang, 1975 † (2)
- Genus Mogulia W. H. Waagen, 1880 † accepted as Bellerophon Montfort, 1808 †
- Genus Phragmolites Conrad, 1838 † (5)
- Genus Pseudopharkidonotus H. Z. Pan & A. G. Cook, 2003 † accepted as Teutonophon Blodgett & Frýda, 1999 †
- Genus Ptomatis J. M. Clarke, 1899 †
- Genus Sorobanobaca Nishida, 1969 †
- Genus Teutonophon Blodgett & Frýda, 1999 † (4)
- Genus Thoralispira Horný & Vizcaino, 1995 † (2)
- Genus Tremagyrus Perner, 1903 † accepted as Bellerophon Montfort, 1808 †
- Genus Yochelsonellisa Waterhouse & Z. Q. Chen, 2006 † (1)
- Family Bellerophontoidea incertae sedis † (7)
- Family Bucanellidae Koken, 1925 † (12)
- Family Bucaniidae Ulrich & Scofield, 1897 † (44)
- Family Cymbulariidae Horný, 1963 † accepted as Cymbulariinae Horný, 1963 †
- Family Euphemitidae Knight, 1956 † (35)
- Family Grandostomatidae Horný, 1962 † accepted as Bucaniinae Ulrich & Scofield, 1897 †
- Family Liljevallospiridae Golikov & Starobogatov, 1989 † accepted as Bellerophontidae McCoy, 1852 †
- Family Protowarthiidae Ulrich & Scofield, 1897 † accepted as Sinuitinae Dall, 1913 †
- Family Pterothecidae P. Fischer, 1883 † (5)
- Family Sinuitidae Dall, 1913 † (18)
- Family Tremanotidae Naef, 1913 † (3)
- Family Tropidodiscidae Knight, 1956 † (19)
- Subfamily Bucanellinae Koken, 1925 † accepted as Bucanellidae Koken, 1925 †
- Subfamily Euphemitinae Knight, 1956 † accepted as Euphemitidae Knight, 1956 †
- Subclass Angiogastropoda represented as Gastropoda
- Subclass Apogastropoda
- Subclass Caenogastropoda (53 670)
- Subclass Gastropoda incertae sedis (308)
- Subclass Heterobranchia (39 172)
- Subclass Neomphaliones accepted as Vetigastropoda
- Subclass Neritimorpha (1 914)
- Subclass Orthogastropoda represented as Gastropoda
- Subclass Patellogastropoda (511)
- Subclass Prosobranchia
- Subclass Psilogastropoda represented as Gastropoda
- Subclass Vetigastropoda (6 782)
- Class Lamellibranchiata accepted as Bivalvia
- Class Loricata accepted as Polyplacophora
- Class Mollusca incertae sedis † (372)
- Class Monoplacophora (229)
- Class Pelecypoda accepted as Bivalvia
- Class Polyplacophora (1 377)
- Class Polyplaxiphora accepted as Polyplacophora
- Class Rostroconchia † (64)
- Class Scaphopoda (752)
- Class Solenoconchia accepted as Scaphopoda
- Class Solenogastres (313)
- Subclass Chaetodermomorpha accepted as Caudofoveata